Using Native tensorflow RNNLayer with dropout within keras model










1















I have a model implemented in Keras, but I need to implement the same model in tensorflow. So, I am looking to implement only the RNN layer of the model and keep the rest the same, that is, the prediction method, fitting the model... are all implemented in keras. Therefore, here is the code:



Keras model:



def emotion_model(max_seq_len, num_features, learning_rate, num_units_1, num_units_2, bidirectional, dropout, num_targets):
# Input layer
inputs = Input(shape=(max_seq_len, num_features))

# 1st layer
net = LSTM(num_units_1, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

# 2nd layer
net = LSTM(num_units_2, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

# Output layer
outputs =
out1 = TimeDistributed(Dense(1))(net) # linear activation
outputs.append(out1)
if num_targets >= 2:
out2 = TimeDistributed(Dense(1))(net) # linear activation
outputs.append(out2)
if num_targets == 3:
out3 = TimeDistributed(Dense(1))(net) # linear activation
outputs.append(out3)

# Create and compile model
rmsprop = RMSprop(lr=learning_rate)
model = Model(inputs=inputs, outputs=outputs)
model.compile(optimizer=rmsprop, loss=ccc_loss) # CCC-based loss function
return model


Now, I would like to replace the LSTM layers above with the equivalent code in tensorflow. Therefore, in a different Module I have implemented the following:



def baseline_model(inputs, cell_Size1, cell_Size2, dropout):
with tf.variable_scope('model', reuse=tf.AUTO_REUSE):
cell1 = tf.nn.rnn_cell.LSTMCell(cell_Size1)
cell1 = tf.nn.rnn_cell.DropoutWrapper(cell1, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

cell2 = tf.nn.rnn_cell.LSTMCell(cell_Size2)
cell2 = tf.nn.rnn_cell.DropoutWrapper(cell2, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

cell = tf.nn.rnn_cell.MultiRNNCell([cell1, cell2], state_is_tuple=True)

# output1: shape=[1, time_steps, 32]
output, new_state = tf.nn.dynamic_rnn(cell, inputs, dtype=tf.float32)

return output


I have tried net = Lambda(partial(baseline_model, dropout))(net) where I removed the cell_size1 and cell_size2 from the method "baseline_model" arguments, yet didn't work



Second, I have tried dumping directly the LSTM layers implemented in tensorflow instead of the LSTM layers in keras above, and this doesn't solve my problem.



Any help is much appreciated!!










share|improve this question


























    1















    I have a model implemented in Keras, but I need to implement the same model in tensorflow. So, I am looking to implement only the RNN layer of the model and keep the rest the same, that is, the prediction method, fitting the model... are all implemented in keras. Therefore, here is the code:



    Keras model:



    def emotion_model(max_seq_len, num_features, learning_rate, num_units_1, num_units_2, bidirectional, dropout, num_targets):
    # Input layer
    inputs = Input(shape=(max_seq_len, num_features))

    # 1st layer
    net = LSTM(num_units_1, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

    # 2nd layer
    net = LSTM(num_units_2, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

    # Output layer
    outputs =
    out1 = TimeDistributed(Dense(1))(net) # linear activation
    outputs.append(out1)
    if num_targets >= 2:
    out2 = TimeDistributed(Dense(1))(net) # linear activation
    outputs.append(out2)
    if num_targets == 3:
    out3 = TimeDistributed(Dense(1))(net) # linear activation
    outputs.append(out3)

    # Create and compile model
    rmsprop = RMSprop(lr=learning_rate)
    model = Model(inputs=inputs, outputs=outputs)
    model.compile(optimizer=rmsprop, loss=ccc_loss) # CCC-based loss function
    return model


    Now, I would like to replace the LSTM layers above with the equivalent code in tensorflow. Therefore, in a different Module I have implemented the following:



    def baseline_model(inputs, cell_Size1, cell_Size2, dropout):
    with tf.variable_scope('model', reuse=tf.AUTO_REUSE):
    cell1 = tf.nn.rnn_cell.LSTMCell(cell_Size1)
    cell1 = tf.nn.rnn_cell.DropoutWrapper(cell1, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

    cell2 = tf.nn.rnn_cell.LSTMCell(cell_Size2)
    cell2 = tf.nn.rnn_cell.DropoutWrapper(cell2, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

    cell = tf.nn.rnn_cell.MultiRNNCell([cell1, cell2], state_is_tuple=True)

    # output1: shape=[1, time_steps, 32]
    output, new_state = tf.nn.dynamic_rnn(cell, inputs, dtype=tf.float32)

    return output


    I have tried net = Lambda(partial(baseline_model, dropout))(net) where I removed the cell_size1 and cell_size2 from the method "baseline_model" arguments, yet didn't work



    Second, I have tried dumping directly the LSTM layers implemented in tensorflow instead of the LSTM layers in keras above, and this doesn't solve my problem.



    Any help is much appreciated!!










    share|improve this question
























      1












      1








      1








      I have a model implemented in Keras, but I need to implement the same model in tensorflow. So, I am looking to implement only the RNN layer of the model and keep the rest the same, that is, the prediction method, fitting the model... are all implemented in keras. Therefore, here is the code:



      Keras model:



      def emotion_model(max_seq_len, num_features, learning_rate, num_units_1, num_units_2, bidirectional, dropout, num_targets):
      # Input layer
      inputs = Input(shape=(max_seq_len, num_features))

      # 1st layer
      net = LSTM(num_units_1, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

      # 2nd layer
      net = LSTM(num_units_2, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

      # Output layer
      outputs =
      out1 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out1)
      if num_targets >= 2:
      out2 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out2)
      if num_targets == 3:
      out3 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out3)

      # Create and compile model
      rmsprop = RMSprop(lr=learning_rate)
      model = Model(inputs=inputs, outputs=outputs)
      model.compile(optimizer=rmsprop, loss=ccc_loss) # CCC-based loss function
      return model


      Now, I would like to replace the LSTM layers above with the equivalent code in tensorflow. Therefore, in a different Module I have implemented the following:



      def baseline_model(inputs, cell_Size1, cell_Size2, dropout):
      with tf.variable_scope('model', reuse=tf.AUTO_REUSE):
      cell1 = tf.nn.rnn_cell.LSTMCell(cell_Size1)
      cell1 = tf.nn.rnn_cell.DropoutWrapper(cell1, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

      cell2 = tf.nn.rnn_cell.LSTMCell(cell_Size2)
      cell2 = tf.nn.rnn_cell.DropoutWrapper(cell2, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

      cell = tf.nn.rnn_cell.MultiRNNCell([cell1, cell2], state_is_tuple=True)

      # output1: shape=[1, time_steps, 32]
      output, new_state = tf.nn.dynamic_rnn(cell, inputs, dtype=tf.float32)

      return output


      I have tried net = Lambda(partial(baseline_model, dropout))(net) where I removed the cell_size1 and cell_size2 from the method "baseline_model" arguments, yet didn't work



      Second, I have tried dumping directly the LSTM layers implemented in tensorflow instead of the LSTM layers in keras above, and this doesn't solve my problem.



      Any help is much appreciated!!










      share|improve this question














      I have a model implemented in Keras, but I need to implement the same model in tensorflow. So, I am looking to implement only the RNN layer of the model and keep the rest the same, that is, the prediction method, fitting the model... are all implemented in keras. Therefore, here is the code:



      Keras model:



      def emotion_model(max_seq_len, num_features, learning_rate, num_units_1, num_units_2, bidirectional, dropout, num_targets):
      # Input layer
      inputs = Input(shape=(max_seq_len, num_features))

      # 1st layer
      net = LSTM(num_units_1, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

      # 2nd layer
      net = LSTM(num_units_2, return_sequences=True, dropout=dropout, recurrent_dropout=dropout)(net)

      # Output layer
      outputs =
      out1 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out1)
      if num_targets >= 2:
      out2 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out2)
      if num_targets == 3:
      out3 = TimeDistributed(Dense(1))(net) # linear activation
      outputs.append(out3)

      # Create and compile model
      rmsprop = RMSprop(lr=learning_rate)
      model = Model(inputs=inputs, outputs=outputs)
      model.compile(optimizer=rmsprop, loss=ccc_loss) # CCC-based loss function
      return model


      Now, I would like to replace the LSTM layers above with the equivalent code in tensorflow. Therefore, in a different Module I have implemented the following:



      def baseline_model(inputs, cell_Size1, cell_Size2, dropout):
      with tf.variable_scope('model', reuse=tf.AUTO_REUSE):
      cell1 = tf.nn.rnn_cell.LSTMCell(cell_Size1)
      cell1 = tf.nn.rnn_cell.DropoutWrapper(cell1, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

      cell2 = tf.nn.rnn_cell.LSTMCell(cell_Size2)
      cell2 = tf.nn.rnn_cell.DropoutWrapper(cell2, input_keep_prob=1.0 - dropout, state_keep_prob=1.0 - dropout)

      cell = tf.nn.rnn_cell.MultiRNNCell([cell1, cell2], state_is_tuple=True)

      # output1: shape=[1, time_steps, 32]
      output, new_state = tf.nn.dynamic_rnn(cell, inputs, dtype=tf.float32)

      return output


      I have tried net = Lambda(partial(baseline_model, dropout))(net) where I removed the cell_size1 and cell_size2 from the method "baseline_model" arguments, yet didn't work



      Second, I have tried dumping directly the LSTM layers implemented in tensorflow instead of the LSTM layers in keras above, and this doesn't solve my problem.



      Any help is much appreciated!!







      python tensorflow keras rnn






      share|improve this question













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      asked Nov 11 '18 at 17:35









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